CS 489 : AI and Bioinformatics

Print Schedule

CS 489 -- Schedule

Tentative - subject to change as course progresses

Date Description Weeks
9/3/2024, 9/5/2024Introduction,Form group, finish survey, explore websiteWeek 1
9/10/2024, 9/12/2024Evolution and Phylogenetic Trees; Homework 1Week 2
9/17/2024, 9/19/2024Sequence analysis and pairwise sequence alignment - Dynamic programming; Homework 2-3Week 3
9/24/2024, 9/27/2024Multiple sequence alignment;In-class exercise 1; Homework 1 due;Week 4
10/1/2024, 10/3/2024BLAST; Homework 4; Homework 2-3 due; final project postedWeek 5
10/8/2024, 10/10/2024Application: Hidden Markov Model; In-class exercise 1 dueWeek 6
10/15/2024, 10/17/2024Catch up, review and brain-storm for mid-term examWeek 7
10/22/2024, 10/24/2024Mid-term oral presentation and written examWeek 8
10/29/2024, 10/31/2024Protein function predictionWeek 9
11/5/2024, 11/7/2024RNA foldingWeek 10
11/12/2024, 11/14/2024Protein foldingWeek 11
11/19/2024, 11/21/2024Protein structure prediction; Homework 5Week 12
11/26/2024, Thanksgiving breakBiological experiment for protein structureWeek 13
12/3/2024, 12/5/2024Catch up and protein function prediction competition. Final project presentation and reportWeek 14
Final exam weekFinal project presentation and reportWeek 15